About Me
Hello! I'm Isabela Camacho, a junior Physics major at Santa Clara University with minors in Mathematics and Computer Science & Engineering.
I'm deeply engaged in research projects ranging from neuropeptide modeling to biophysics, and I have a passion for coding.
In the summer of 2025, I worked at Cold Spring Harbor Laboratory in David Klindt's Lab, studying when linear probes fail and how sparse autoencoders and dictionary learning can reveal more interpretable latent structure.
During the summer of 2024, I worked in Dr. David J. Anderson's lab at Caltech under my mentor Aditya Nair centered on neuropeptide release modeling. Our goal was to more accurately model the biophysical mechanisms that give rise to line attractor networks in the ventrolateral subregion of the ventromedial hypothalamus (VMHvL). My previous work experience in the summer of 2023 was in analyzing the Shannon entropy of the green flourescent protein (GFP) to predict its conserved residues when folding under my mentor Dr. Shyam Gajavelli at the University of Florida.
As of October 2024, I have joined Prof. Michelle McCulley's lab at SCU to continue pursuing my protein folding research. In the McCulley labe, I use molecular dynamics to analyze protein–DNA chimeras and connect simulation results to protein folding and stability.
In the future, I aim to pursue graduate studies in Nueroscience or Biophysics. I am passionate about using my computational background to model biological systems with the hope of creating applicable medical solutions.
Santa Clara University, Santa Clara, CA
Bachelor of Science in Physics
Minors: Mathematics, Computer Science & Engineering
Sept 2022 – Jun 2026
Research Experience
- Santa Clara University Undergraduate Researcher, Dr. Michelle McCulley Lab: Molecular dynamics simulations of protein–DNA chimeras; developed numerical methods for protein stability and DNA-binding persistence (Sept 2024 – Present).
- Cold Spring Harbor Laboratory Undergraduate Research Program, Dr. David Klindt Lab: Studied limits of linear probes; implemented sparse autoencoders (SAEs) and dictionary learning for neural network interpretability; prepared manuscript (Jun 2025 – Aug 2025).
- Caltech WAVE Program, Dr. David J. Anderson Lab: Mechanistic models of neuropeptide release in line attractor networks (Jun 2024 – Aug 2024).
- University of Florida Protein Residue Project, Dr. Shyam Gajavelli: Entropy analysis of green fluorescent protein folding (Jun 2023 – Jun 2024).
- Young Researchers Program, Dr. Claudia Ochatt: Laser-Induced Breakdown Spectroscopy (LIBS) robot development and analysis (Sep 2020 – Nov 2021).
Contact
Email: icamacho@scu.edu
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